Faculty members in the College of Science & Mathematics can deposit their publications here if they are cleared for public access. This includes Open Access journal articles, accepted manuscripts when allowed by the publisher, technical reports, conference presentations, and any works published under a Creative Commons license.
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Submissions from 2024
Visual Analytics in Explaining Neural Networks with Neuron Clustering, Gulsum Alicioglu and Bo Sun
Discovering Potential in Non-Cancer Medications: A Promising Breakthrough for Multiple Myeloma Patients., Omar S Al-Odat, Emily Nelson, Tulin Budak-Alpdogan, Subash C. Jonnalagadda, Dhimant Desai, and Manoj K Pandey
Assessment of Sexual Violence Risk Perception in Men Who Have Sex With Men: Proposal for the Development and Validation of "G-Date"., D. J. Angelone, Damon Mitchell, Brooke Wells, Megan Korovich, Alexandra Nicoletti, and Dustin Fife
Computational study of binding of oseltamivir to neuraminidase mutants of influenza A virus, Muhammad Arba, Sri Wahyuli, Setyanto Tri Wahyudi, Amir Karton, and Chun Wu
Harnessing the Synergy of Fe and Co with Carbon Nanofibers for Enhanced CO, Kevin Arizapana, John Schossig, Michael Wildy, Daniel Weber, Akash Gandotra, Sumedha Jayaraman, Wanying Wei, Kai Xu, Lei Yu, Amos M Mugweru, Islam Mantawy, Cheng Zhang, and Ping Lu
Gender differences in relations between social comparison, social support, and sleep disturbance among midlife and older adults., Iris Bercovitz, Gabrielle M Salvatore, Jacqueline A Mogle, and Danielle Arigo
Pathways to therapy resistance: The sheltering effect of the bone marrow microenvironment to multiple myeloma cells, Kuntal Bhowmick, Max von Suskil, Omar Al-Odat, Weam Othman Elbezanti, Subash C. Jonnalagadda, Tulin Budak-Alpdogan, and Manoj K. Pandey
Binding Mechanism of the Active Form of Molnupiravir to RdRp of SARS-CoV-2 and Designing Potential Analogues: Insights from Molecular Dynamics Simulations., Justin Carbone, Nicholas J Paradis, Dylan Brunt, and Chun Wu
Novel Inhibitors to MmpL3 Transporter of Mycobacterium tuberculosis by Structure-Based High-Throughput Virtual Screening and Molecular Dynamics Simulations, Hetanshi Choksi, Justin Carbone, Nicholas J. Paradis, Lucas Bennett, Candice Bui-Linh, and Chun Wu
Considerations for method development and method translation in capillary liquid chromatography: A tutorial, Samuel W. Foster, Christopher Piccolo, Eliza K. Hanson, and James P. Grinias
Deep retinal layer microvasculature alterations in schizophrenia, Samantha Fradkin, Deepthi Bannai, Paulo Lizano, Adriann Lai, Christen Crosta, Judy L. Thompson, and Steven M. Silverstein
Evolution of the substance use landscape: Implications for contingency management., Shelby Goodwin, Kimberly C Kirby, and Bethany Raiff
Mean Flow and Dispersion in the Western Mediterranean Sea from Drifter Observations, Helga Huntley; James Turbett; A.D. Kirwan, Jr.; and Pierre-Marie Poulain
Acceptability of heart rate-based remote monitoring of smoking status., Matthew Mitnick, Shelby Goodwin, Mikaela Bubna, Justin S White, and Bethany Raiff
Comparing researchers’ degree of dichotomous thinking using frequentist versus Bayesian null hypothesis testing, Jasmine Muradchanian, Rink Hoekstra, Henk Kiers, Dustin Fife, and Don van Ravenzwaaij
A Growth Mindset Scale for Young Children (GM-C): Development and validation among children from the United States and South Africa., Melis Muradoglu, Tenelle Porter, Kali Trzesniewski, and Andrei Cimpian
Protein and Polysaccharide-Based Optical Materials for Biomedical Applications., Gianna Riviello, Brendan Connor, Jake McBrearty, Gianna Rodriguez, and Xiao Hu
Inactivation of bacteria using synergistic hydrogen peroxide with split-dose nanosecond pulsed electric field exposures., Zachary Rosenzweig, Jerrick Garcia, Gary L Thompson, and Lark Perez
Phosphorylation-driven epichaperome assembly is a regulator of cellular adaptability and proliferation., Tanaya Roychowdhury, Seth W McNutt, Chiranjeevi Pasala, Hieu Nguyen, Daniel T Thornton, Sahil Sharma, Luke Botticelli, Chander S Digwal, Suhasini Joshi, Nan Yang, Palak Panchal, Souparna Chakrabarty, Sadik Bay, Vladimir Markov, Charlene Kwong, Jeanine Lisanti, Sun Young Chung, Stephen D Ginsberg, Pengrong Yan, Elisa De Stanchina, Adriana Corben, Shanu Modi, Mary Alpaugh, Giorgio Colombo, Hediye Erdjument-Bromage, Thomas A Neubert, Robert J Chalkley, Peter R Baker, Alma L Burlingame, Anna Rodina, Gabriela Chiosis, and Feixia Chu
Women’s comfort with mobile applications for menstrual cycle self-monitoring following the overturning of Roe v. Wade, Gabrielle M. Salvatore, Iris Bercovitz, and Danielle Arigo
Electrochromic Polymers: From Electrodeposition to Hybrid Solid Devices, Haradou Sare and Dongmei Dong
Novel High-Strength and High-Temperature Resistant Composite Material for In-Space Optical Mining Applications: Modeling, Design, and Simulation at the Polymer and Atomic/Molecular Levels., Haradou Sare and Dongmei Dong
Assessing the Usability and Feasibility of Digital Assistant Tools for Direct Support Professionals: Participatory Design and Pilot-Testing, Patrice Dolhonde Tremoulet, Andrea Lobo, Christina A. Simmons, Ganesh Baliga, and Matthew Brady
An Online Nanoinformatics Platform Empowering Computational Modeling of Nanomaterials by Nanostructure Annotations and Machine Learning Toolkits., Tong Wang, Daniel P Russo, Philip Demokritou, Xuelian Jia, Heng Huang, Xinyu Yang, and Hao Zhu
Interest in an Instagram-delivered gestational weight gain intervention among pregnant women with pre-pregnancy overweight or obesity, Molly E. Waring, Danielle Arigo, Lauren R. Rudin, Sherry L. Pogoto, Tiffany A. Moore Simas, and Alexa B. Horkachuck
Designing Dual-Responsive Drug Delivery Systems: The Role of Phase Change Materials and Metal-Organic Frameworks., Wanying Wei and Ping Lu
Chronic Stress-Induced Neuroinflammation: Relevance of Rodent Models to Human Disease., Abigail G White, Elias Elias, Andrea Orozco, Shivon A Robinson, and Melissa T Manners
A cocktail nanovaccine targeting key entry glycoproteins elicits high neutralizing antibody levels against EBV infection., Ling Zhong, Wanlin Zhang, Hong Liu, Xinyu Zhang, Zeyu Yang, Zhenfu Wen, Ling Chen, Haolin Chen, Yanran Luo, Yanhong Chen, Qisheng Feng, Mu-Sheng Zeng, Qinjian Zhao, Lixin Liu, Claude Krummenacher, Yi-Xin Zeng, Yongming Chen, Miao Xu, and Xiao Zhang
Revolutionizing wild silk fibers: Ultrasound enhances structure, properties, and regenerability of protein biomaterials in ionic liquids., Xincheng Zhuang, Haomiao Zhu, Fang Wang, and Xiao Hu
Submissions from 2023
Selection of and Response to Physical Activity-Based Social Comparisons in a Digital Environment: Series of Daily Assessment Studies., Danielle Arigo, Robert C Gray, Diane H Dallal, Jennifer Villareale, and Jichen Zhu
"You get what you need when you need it": A mixed methods examination of the feasibility and acceptability of a tailored digital tool to promote physical activity among women in midlife., Danielle Arigo, Jonathan Mathias Lassiter, Kiri Baga, Daija A Jackson, Andrea Lobo, and Timothy C Guetterman
Molecularly Imprinted Electrochemical Sensor Based on Poly (O-Phenylenediamine) for Sensitive Detection of Oxycodone in Water, Pranaya Charkravarthula and Amos Mugweru
Reconversion of Parahydrogen Gas in Surfactant-Coated Glass NMR Tubes, Robert V. Chimenti, James Daley, James Sack, Jennifer Necsutu, and Nicholas Whiting
The Integration of Biopolymer-Based Materials for Energy Storage Applications: A Review., Shrey Dalwadi, Arnav Goel, Constantine Kapetanakis, David Salas-de la Cruz, and Xiao Hu
Fluorescent molecular rotors as versatile in situ sensors for protein quantitation, Kevin Daus, Sorachat Tharamak, Wanchai Pluempanupat, Peter Galie, Maria A Theodoraki, Emmanuel A Theodorakis, and Mary Alpaugh
scTIGER: A Deep-Learning Method for Inferring Gene Regulatory Networks from Case versus Control scRNA-seq Datasets., Madison Dautle, Shaoqiang Zhang, and Yong Chen
Probing the Activation Mechanisms of Agonist DPI-287 to Delta-Opioid Receptor and Novel Agonists Using Ensemble-Based Virtual Screening with Molecular Dynamics Simulations., Emily Dean, AnneMarie Dominique, Americus Palillero, Annie Tran, Nicholas Paradis, and Chun Wu
Past, Present, and a Glance into the Future of Multiple Myeloma Treatment., Weam Othman Elbezanti, Kishore B Challagundla, Subash C. Jonnalagadda, Tulin Budak-Alpdogan, and Manoj K Pandey
Voluntary wheel running promotes resilience to the behavioral effects of unpredictable chronic mild stress in male and female mice., Elias Elias, Ariel Y Zhang, Abigail G White, Matthew J Pyle, and Melissa T Manners
Essential Oils Composition and Biological Activity of Chamaecyparis obtusa, Chrysopogon nigritanus and Lavandula coronopifolia Grown Wild in Sudan, Loai M H Eltayeb, Sakina Yagi, Hanan M M Mohamed, Gokhan Zengin, Mohammad Ali Shariati, Maksim Rebezov, Abdullah Ibrahim Uba, and Jose Manuel Lorenzo
Synthesis and Antibiotic Activity of Chitosan-Based Comb-like Co-Polypeptides., Timothy P Enright, Dominic L Garcia, Gia Storti, Jason E Heindl, and Alexander Sidorenko
Physics-Based Human-in-the-Loop Machine Learning Combined with Genetic Algorithm Search for Multi-Criteria Optimization: Electrochemical CO2 Reduction Reaction, Naohiro Fujinuma and Samuel Lofland
Development, feasibility, and acceptability of SPoRT: a dating violence and sexual risk prevention intervention for college student-athletes., Nicole Jaffe, Meredith Jones, and D. J. Angelone
Development of antibacterial neural stimulation electrodes via hierarchical surface restructuring and atomic layer deposition., Henna Khosla, Wesley Seche, Daniel Ammerman, Sahar Elyahoodayan, Gregory A. Caputo, Jeffrey Hettinger, Shahram Amini, and Gang Feng
Disruptive lysosomal-metabolic signaling and neurodevelopmental deficits that precede Purkinje cell loss in a mouse model of Niemann-Pick Type-C disease., Sarah Kim, Kathleen Ochoa, Sierra E Melli, Fawad A K Yousufzai, Zerian D Barrera, Aela A Williams, Gianna McIntyre, Esteban Delgado, James N Bolish, Collin M Macleod, Mary Boghos, Hayden P Lens, Alex G Ramos, Vincent B Wilson, Kelly Maloney, Zachary M Padron, Amaal H Khan, Rosa E Blanco, and Ileana Soto
Data Analysis of Lossy Generative Data Compression for Robust Remote Deep Inference, Silvija Kokalj-Filipovic
Self-supervised deep clustering of single-cell RNA-seq data to hierarchically detect rare cell populations., Tianyuan Lei, Ruoyu Chen, Shaoqiang Zhang, and Yong Chen
Trehalose enhances mitochondria deficits in human NPC1 mutant fibroblasts but disrupts mouse Purkinje cell dendritic growth ex vivo., Collin M MacLeod, Fawad A K Yousufzai, Liam T Spencer, Sarah Kim, Lucianne A Rivera-Rosario, Zerian D Barrera, Lindsay Walsh, Claude Krummenacher, Benjamin Carone, and Ileana Soto
Impacts of Hydrophobic Mismatch on Antimicrobial Peptide Efficacy and Bilayer Permeabilization., Steven Meier, Zachary M Ridgway, Angela L Picciano, and Gregory A. Caputo
Effect of Hf alloying on magnetic, structural, and magnetostrictive properties in FeCo films for magnetoelectric heterostructure devices, Thomas Mion, Margo Staruch, Konrad Bussmann, Goran Karapetrov, Olaf van 't Erve, Sara Mills, Heonjune Ryou, Ramasis Goswami, Patrick G. Callahan, David J. Rowenhorst, Syed B. Qadri, Samuel Lofland, and Peter Finkel
Mathematical modeling and inverse problems in applications, Thanh T. Nguyen
Online test administration results in students selecting more responses to multiple-choice-multiple-response items, Alexis Olsho, Trevor Smith, Philip Eaton, Charlotte Zimmerman, Andrew Boudreaux, and Suzanne White
CO2 to Value-Added Chemicals: Synthesis and Performance of Mono- and Bimetallic Nickel–Cobalt Nanofiber Catalysts, John Schossig, Akash Gandotra, Kevin Arizapana, Daniel Weber, Michael Joshua Wildy, Wanying Wei, Kai Xu, Lei Yu, Robert Chimenti, Islam Mantawy, and Ping Lu
Direct Support Professionals' Perspectives on Using Technology to Help Support Adults With Autism Spectrum Disorder: Mixed Methods Study., Christina A. Simmons, Abigail E Moretti, Andrea F Lobo, and Patrice D Tremoulet
Novel Signposts on the Road from Natural Sources to Pharmaceutical Applications: A Combinative Approach between LC-DAD-MS and Offline LC-NMR for the Biochemical Characterization of Two Hypericum Species (H. montbretii and H. origanifolium), Stefania Sut, Stefano Dall'Acqua, Gokhan Zengin, Ismail Senkardes, Abdullahi Ibrahim Uba, Abdelhakim Bouyahya, and Abdurrahman Aktumsek
Using Alternating Minimization and Convexified Carleman Weighted Objective Functional for a Time-Domain Inverse Scattering Problem, Nguyen T. Thanh
Stabilizing G-quadruplex DNA and RNA structures with ionic liquids, Timothy Vaden
KIF6 Trp719Arg Genetic Variant Increases Risk for Thoracic Aortic Dissection, Juan J Velasco, Yupeng Li, Bulat A Ziganshin, Mohammad A Zafar, John A Rizzo, Deqiong Ma, Hui Zang, Asanish Kalyanasundaram, and John A Elefteriades
Promoter Effect on Carbon Nanosphere-Encapsulated Fe-Co Catalysts for Converting CO2 to Light Olefins, Daniel Weber, Akash Gandotra, John Schossig, Heng Zhang, Michael Wildy, Wanying Wei, Kevin Arizapana, Jin Zhong Zhang, Ping Lu, and Cheng Zhang
Developing a Game (Inner Dragon) Within a Leading Smartphone App for Smoking Cessation: Design and Feasibility Evaluation Study., Justin S White, Marie K Salem, Séverine Toussaert, J Lee Westmaas, Bethany Raiff, David Crane, Edward Warrender, Courtney Lyles, Lorien Abroms, and Johannes Thrul
Developing Carbon Quantum Dots as Multimodal Contrast Agents, Nicholas Whiting
Electrospun Nanofibers: Shaping the Future of Controlled and Responsive Drug Delivery., Michael Joshua Wildy and Ping Lu
Neutralizing antibodies against EBV gp42 show potent in vivo protection and define novel epitopes, Qian Wu, Ling Zhong, Dongmei Wei, Wanlin Zhang, Junping Hong, Yinfeng Kang, Kaiyun Chen, Yang Huang, Qingbing Zheng, Miao Xu, Mu-Sheng Zeng, Yi-Xin Zeng, Ningshao Xia, Qinjian Zhao, Claude Krummenacher, Yixin Chen, and Xiao Zhang
Ultrasound-assisted air-jet spinning of silk fibroin-soy protein nanofiber composite biomaterials., Futian Yang, Fang Wang, Janine Mazahreh, and Xiao Hu
Submissions from 2022
An Injury Severity Prediction-Driven Accident Prevention System, Gulsum Alicioglu, Bo Sun, and Shen-Shyang Ho
Discovering new potential inhibitors to SARS-CoV-2 RNA dependent RNA polymerase (RdRp) using high throughput virtual screening and molecular dynamics simulations., Dylan Brunt, Phillip M Lakernick, and Chun Wu
Discovering new potential inhibitors to SARS-CoV-2 RNA dependent RNA polymerase (RdRp) using high throughput virtual screening and molecular dynamics simulations., Dylan Brunt, Phillip M Lakernick, and Chun Wu
Role of Draw Rate and Molecular Weight when Electrospun Nanofibers are Post-Drawn with Residual Solvent, Adriano Conte, Xiao Hu, and Vincent Beachley
Multifunctional silk fibroin – Poly(L-lactic acid) porous nanofibers: Designing adjustable nanopores to control composite properties and biological responses, Hangling Gu, Fang Wang, Hao Liu, Kyle Printon, and Xiao Hu
Rowan-BMS Collaboration, Vasil Hnatyshin
Neural Substrates of Homing Pigeon Spatial Navigation: Results from Electrophysiology Studies, Gerald E. Hough
Identification of Loop Current Ring Separation Events in the Gulf of Mexico, Helga Huntley
Dating Violence and Sexual Risk Prevention for Young Mothers, Meredith Jones
Malware Binary Image Classification Using Convolutional Neural Networks, John Kiger, Shen-Shyang Ho, and Vahid Heydari
Antiviral Drug Development: Targeted Design and Broad Spectrum Approach, Claude Krummenacher
Controlling the structure and properties of semi-crystalline cellulose/silk-fibroin biocomposites by ionic liquid type and hydrogen peroxide concentration, Stacy A. Love, Xiao Hu, and David Salas-de la Cruz
Recent Progress in Biopolymer-Based Hydrogel Materials for Biomedical Applications., Ayaz Mahmood, Dev Patel, Brandon Hickson, John DesRochers, and Xiao Hu
Post-Acquisition Hyperpolarized 29Silicon MR Image Processing for Visualization of Colorectal Lesions Using a User-Friendly Graphical Interface, Caitlin V McCowan, Duncan Salmon, Jingzhe Hu, Shivanand Pudakalakatti, Nicholas Whiting, Jennifer S Davis, Daniel D Carson, Niki M Zacharias, Pratip K Bhattacharya, and Mary C Farach-Carson
Technical Analysis of Thanos Ransomware, Ikuromor Ogiriki, Christopher Beck, and Vahid Heydari
LC-MS/TOF Characterization and Stability Study of Artesunate in Different Solvent Systems, Kogila Oke and Amos Mugweru
LC-MS/TOF Characterization and Stability Study of Artesunate in Different Solvent Systems, Kogila Oke and Amos Mugweru
Mindfulness-based school interventions: A systematic review of outcome evidence quality by study design., Mary L Phan, Tyler L Renshaw, Julie Caramanico, Jeffrey M. Greeson, Elizabeth MacKenzie, Zabryna Atkinson-Diaz, Natalie Doppelt, Hungtzu Tai, David S Mandell, and Heather J Nuske
Harnessing the 4DEE Framework to Redesign an Introductory Ecology Course in a Changing Higher Education Landscape, Nathan Ruhl, Patrick Crumrine, Jennifer Oberle, Courtney Richmond, Shelly Thomas, and Sara Wright
Clinical decision support for intervention reduction in neonatal patients: A usability assessment, Patrice Dolhonde Tremoulet
Improving Patient Care Coordination, Patrice Dolhonde Tremoulet
Identifying Video Game Preferences Among Adults Interested in Quitting Smoking Cigarettes: Survey Study., Caitlyn R Upton, Jessica A Nastasi, and Bethany Raiff
Nanofibers for Renewable Energy, Michael Wildy and Ping Lu
Predictors of Alcohol Hangover in College Students, Chelsie Young
Submissions from 2021
Mcl-1 Inhibition: Managing Malignancy in Multiple Myeloma., Omar Al-Odat, Max von Suskil, Robert Chitren, Weam Elbezanti, Sandeep Srivastava, Tulin Budak-Alpddogan, Subash C. Jonnalagadda, Bharat Aggarwal, and Manoj Pandey
A multi-study approach to refining ecological momentary assessment measures for use among midlife women with elevated risk for cardiovascular disease., Danielle Arigo, Jacqueline A Mogle, Megan M Brown, and Adarsh Gupta
Relations between social comparisons and physical activity among women in midlife with elevated risk for cardiovascular disease: an ecological momentary assessment study., Danielle Arigo, Jacqueline A Mogle, and Joshua M Smyth
Ultrasound regulated flexible protein materials: Fabrication, structure and physical-biological properties., Bowen Cai, Hanling Gu, Fang Wang, Kyle Printon, Zhenggui Gu, and Xiao Hu
Advances in ultra-high-pressure and multi-dimensional liquid chromatography instrumentation and workflows, Jelle De Vos, Dwight Stoll, Stephan Buckenmaier, Sebastiaan Eeltink, and James P. Grinias
Schizotypy, lifestyle behaviors, and health indicators in a young adult sample, Thomas J. Dinzeo and Umashanger Thayasivam
Beneficial Impacts of Incorporating the Non-Natural Amino Acid Azulenyl-Alanine into the Trp-Rich Antimicrobial Peptide buCATHL4B., Areetha R D'Souza, Matthew R Necelis, Alona Kulesha, Gregory A. Caputo, and Olga V Makhlynets
Assessing the capacity for mental manipulation in patients with statistically-determined mild cognitive impairment using digital technology, Sheina Emrani, Melissa Lamar, Catherine C. Price, Satya Baliga, Victor J. Wasserman, Emily Matusz, Rod Swenson, Ganesh Baliga, and David J. Libon
Patients' beliefs towards contingency management: Target behaviours, incentives and the remote application of these interventions, Carol-Ann Getty, Tim Weaver, Michael Lynskey, Kimberly C. Kirby, Jesse Dallery, and Nicola Metrebian
Biopolymer-Based Filtration Materials, Christopher R. Gough, Kayla Callaway, Everett Spencer, Kilian Leisy, Guoxiang Jiang, Shu Yang, and Xiao Hu
